miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST003598
species:
Zea mays
miRNA family:
MIR2504
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGATCAAGTTTATAGAAAAA
miRNA*
GTTCCTATAAATTTGGTTAAAT
mismatches:
1
bulges:
1
View larger
pre-miRNA
GTGACTACTCCCTCCCTATGTTTCATGTTATAAGTTGCTTTGATTTTTTTTCTAATCAAATTTCTTTAGAT
TTGATCAAGTTTATAGAAAAA
TATAATAA
TATTTTCAATACAAAATAGATATATTATCATAATATATTCAGCGTAATATTTAATAAAACTAATTTTGTGTTGTAAATGTTGCTAATT
GTTCCTATAAAT
TTGGTTAAAT
CTATAGAAGTTTGACTACGAANAAAATCAAAAACAACTTATAAAATATAACACGGAGGAAGTATTAGC
dot-bracket secondary structure
.....((((.(((((...((((..((.((((((((((.(((((((((.(((.((.((((((((((.(((((
((((((((((((((((((.((
(.((.(((
(((((.(((((((((((((...(((((..(((.(((.......))).))).)))))...)).))))))))))).)))))))).)))))
.)).))))))))
))))))))))
))).)))))))))).)).))).)))))))))..)))))))))).))..)))).))))).)))).....
SIMILARITIES
miRBase
sbi-MIR437d
:
0.0002
PMRD
sbi-miR437d
:
0.0002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record